Volume Export
mincWriteVolume(buffer, ...) # S3 method for mincSingleDim mincWriteVolume(buffer, output.filename, clobber = NULL, ...) # S3 method for mincMultiDim mincWriteVolume(buffer, output.filename, column = 1, like.filename = NULL, clobber = NULL, ...) # S3 method for default mincWriteVolume(buffer, output.filename, like.filename, clobber = NULL, ...)
| buffer | The data to be written to file. Usually the result of mincLm or some such command |
|---|---|
| ... | additional arguments to pass to methods |
| output.filename | The filename to which to write the data to |
| clobber | Overwrite existing output file when set to TRUE, will not overwrite when set to FALSE and will prompt when NULL |
| column | Optional name of the column of a multidimensional MINC object to write out. By default the first column is used |
| like.filename | An existing MINC filename which has the same dimensions as the data to be written out. Normally this information is stored inside MINC data objects |
A list with the parameters of the minc volume written
Writes a MINC volume to file
This function takes numeric data, usually the results computed from one of the other mincFunctions, and writes it to file so that it can be viewed or manipulated with the standard MINC tools
mincSingleDim: mincSingleDim
mincMultiDim: mincMultiDim
default: default
mincWriteVolume,mincLm,mincFDR,mincMean,mincSd
# NOT RUN { getRMINCTestData() # read the text file describing the dataset gf <- read.csv("/tmp/rminctestdata/test_data_set.csv") # run a linear model relating the data in all voxels to Sex vs <- mincLm(gf$jacobians_fixed_2 ~ Sex, gf) # write the results to file mincWriteVolume(vs, "Fstat.mnc", "F-statistic") # }