anatSummaries

Source: R/minc_anatomy.R

These functions are used to compute the mean, standard deviation, sum, or variance of every region in an anat structure.

anatMean(anat)

anatSum(anat)

anatVar(anat)

anatSd(anat)

Arguments

anat

anat structure.

Value

out: The output will be a single vector containing as many elements as there are regions in the input variable.

Functions

  • anatMean: mean

  • anatSum: sum

  • anatVar: variance

  • anatSd: standard deviation

Examples

# NOT RUN {
getRMINCTestData()
gf = read.csv("/tmp/rminctestdata/CIVET_TEST.csv")
gf = civet.getAllFilenames(gf,"ID","TEST","/tmp/rminctestdata/CIVET","TRUE","1.1.12")
gf = civet.readAllCivetFiles("/tmp/rminctestdata/AAL.csv",gf)
vm <- anatMean(gf$lobeThickness)
# }