Calculates statistics and coefficients for linear model of specified vertex files

Source: R/minc_vertex_statistics.R

Calculates statistics and coefficients for linear model of specified vertex files

vertexLm(formula, data, subset = NULL)

Arguments

formula

a model formula. The RHS of the formula may contain one term with filenames. If so only the + operator may be used, and only two terms may appear on the RHS
data

a data.frame containing variables in formula
subset

rows to be used, by default all are used

Value

Returns an object containing the R-Squared value,beta coefficients, F and t statistcs that can be passed directly into vertexFDR.

See also

mincLm,anatLm,vertexFDR

Examples

# NOT RUN {
getRMINCTestData()
gf = read.csv("/tmp/rminctestdata/CIVET_TEST.csv")
gf = civet.getAllFilenames(gf,"ID","TEST","/tmp/rminctestdata/CIVET","TRUE","1.1.12")
gf = civet.readAllCivetFiles("/tmp/rminctestdata/AAL.csv",gf)
result = vertexLm(CIVETFILES$nativeRMStlink20mmleft~Primary.Diagnosis,gf)
# }